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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936714.1_cds_XP_016482207.1_73454
CDS Infomation

[gene=LOC107803103] [db_xref=GeneID:107803103] [protein=katanin p60 ATPase-containing subunit A-like 2 isoform X2] [protein_id=XP_016482207.1] [location=complement(join(33922..34055,34614..34836,35450..35551,36284..36444,37486..37570,37853..37919,38256..38363,38498..38563,38761..38828,38904..39038,40709..40747))] [gbkey=CDS]
Sequence

ATGGCGGACGAACCTGCGTTGACTCGCTGGTCCTTCCCGTTTGGGAGGAAGAAGGCTCCT
GCAACTGAGAATGGTGATGCCGTACAAAATGGAAATTCTTCGACTGTGACTGCAAATGGA
AATGGACATGTGCGGAACACTGCAGAATTGTCCATTTACGAGCAATATAATCAGGCTAAT
GGAGGTGCAGCACACTCTAATGGAGTTAATGGAGTTCAGTCTGTCGGAGTAGTTGGAAAA
CCGCAAAGATCTCTACTTCCCCCTTTTGAGTCTGCAGAAATGCGTGCTTTAGGAGAAAGT
TTAAGCAGGGATATTCTTCGTGGTAATCCAGATGTAAAGTGGGAGAGCATTAAAGGATTA
GAGACTGCCAAGCGTCTACTAAAAGAAGCAGTTGTCATGCCGATTAAATATCCAAAGTAC
TTTAAAGGTCTTCTAACTCCATGGAAAGGTATCCTCCTTTTTGGCCCTCCAGGAACAGGA
AAGACGATGCTTGCGAAGGCAGTTGCAACCGAATGCAATACCACATTTTTCAATATCTCA
GCATCGTCAGTTGTCAGCAAATGGCGTGGTGATTCTGAGAAATTGATAAAAGTGTTATTC
GAGCTCGCCAGGCATCATGCACCTTCAACTATCTTTCTAGATGAAATTGATGCAATTATC
AGTCAACGTGGGGAAGCACGTAGTGAACATGAATCTAGTAGGCGTTTAAAAACAGAACTG
CTCATACAGATGGACGGTTTGAATCGGACAGATGAACTTGTATTTGTTCTGGCAGCAACA
AATCTTCCCTGGGAACTGGATGCAGCAATGCTTCGTCGTCTTGAGAAGCGGATCCTCGTG
CCCCTTCCGGAGCCAGAAGCAAGGTGCGCCATGTTTGAGGAATTACTACCATCACTGCCT
GAAGAGGAGCCACTTCCATATGATTTATTGGTAGAAAAGACAGAAGGTTTTTCCGGTTCT
GATATTCGGCTGTTGTGCAAGGAGGCTGCCATGCAACCATTAAGACGTTTAATGGCAAAA
CTTGAAGAGAAAGAAGAAGTGGTGCCTGAGGATGAGTTGCCCAACGTTGGACCAATAACT
GTGAGAGATATTGAGATGGCATTGAAGAACACTAGACCATCTGCACACCTTCATGCGCCG
AGGTATGACAAGTTCAACTCAGATTATGGCAGCCAAGTGCTCCAGTGA

Peptide Sequence

PEP ID

XP_016482207.1
PEP Infomation

PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Nicotiana tabacum]
Sequence

MADEPALTRWSFPFGRKKAPATENGDAVQNGNSSTVTANGNGHVRNTAELSIYEQYNQAN
GGAAHSNGVNGVQSVGVVGKPQRSLLPPFESAEMRALGESLSRDILRGNPDVKWESIKGL
ETAKRLLKEAVVMPIKYPKYFKGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNIS
ASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHESSRRLKTEL
LIQMDGLNRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARCAMFEELLPSLP
EEEPLPYDLLVEKTEGFSGSDIRLLCKEAAMQPLRRLMAKLEEKEEVVPEDELPNVGPIT
VRDIEMALKNTRPSAHLHAPRYDKFNSDYGSQVLQ

Transcript Sequence

Gene sequence data has not been registered.